Aliases : COX1
Description : not classified & original description: CDS=1-180
Gene families : OG0003734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003734_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0264.g026928 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATMG01360 | COX1 | cytochrome oxidase | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g13913 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.12 | OrthoFinder output from all 47 species | |
| Ala_g26228 | COX1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g39523 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03025 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g06478 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g15521 | COX1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25091 | COX1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.17G026300.1 | COX1, Ceric.17G026300 | not classified & original description: pacid=50617973... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z245600.1 | COX1, Ceric.1Z245600 | not classified & original description: pacid=50638984... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.1Z287000.1 | COX1, Ceric.1Z287000 | not classified & original description: pacid=50577020... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.1Z295800.1 | COX1, Ceric.1Z295800 | not classified & original description: pacid=50613701... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.1Z313900.1 | COX1, Ceric.1Z313900 | not classified & original description: pacid=50567670... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01020676001 | COX1 | Cytochrome c oxidase subunit 1 OS=Glycine max | 0.07 | OrthoFinder output from all 47 species | |
| Gb_06295 | No alias | Cytochrome c oxidase subunit 1 OS=Raphanus sativus... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_31333 | COX1 | component COX1 of cytochrome c oxidase complex | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g33946.1 | COX1, LOC_Os12g33946 | component COX1 of cytochrome c oxidase complex | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32196 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g21852 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07659 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.09 | OrthoFinder output from all 47 species | |
| Pir_g02721 | COX1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c4_28940V3.1 | COX1, Pp3c4_28940 | cytochrome oxidase | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_28946V3.1 | COX1, Pp3c4_28946 | cytochrome oxidase | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g12101 | No alias | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g41380 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc00g500186.1.1 | COX1, Solyc00g500186 | component COX1 of cytochrome c oxidase complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc00g500250.1.1 | COX1, Solyc00g500250 | component COX1 of cytochrome c oxidase complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc00g500349.1.1 | COX1, Solyc00g500349 | component COX1 of cytochrome c oxidase complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g019510.4.1 | COX1, Solyc07g019510 | component COX1 of cytochrome c oxidase complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g029290.1.1 | Solyc08g029290 | Cytochrome c oxidase subunit 1 OS=Sorghum bicolor... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g063610.3.1 | COX1, Solyc11g063610 | Cytochrome c oxidase subunit 1 OS=Oenothera berteroana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22204 | COX1 | EC_1.9 oxidoreductase acting on heme group of donor &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016168 | chlorophyll binding | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
