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  5. Sacu_v1.1_s0264.g026929

Sacu_v1.1_s0264.g026929


Description : not classified & original description: CDS=1-2745


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0264.g026929

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00062930 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.03 OrthoFinder output from all 47 species
Adi_g005702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10792 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09002 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22046.t1 Aspi01Gene22046 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.01 OrthoFinder output from all 47 species
Cba_g29580 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g38005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67679 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.01 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.02 OrthoFinder output from all 47 species
Ceric.20G001900.1 Ceric.20G001900 not classified & original description: pacid=50565969... 0.03 OrthoFinder output from all 47 species
Ceric.21G062800.1 Ceric.21G062800 not classified & original description: pacid=50603272... 0.03 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.01 OrthoFinder output from all 47 species
Ceric.36G001100.1 Ceric.36G001100 not classified & original description: pacid=50568746... 0.03 OrthoFinder output from all 47 species
Dac_g18994 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25800 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g55840.1 LOC_Os03g55840 Pentatricopeptide repeat-containing protein DWY1,... 0.03 OrthoFinder output from all 47 species
Lfl_g07069 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06724 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43031 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16177 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo91775 No alias Pentatricopeptide repeat-containing protein At4g25270,... 0.01 OrthoFinder output from all 47 species
Spa_g04723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 213 261
IPR002885 Pentatricopeptide_repeat 447 493
IPR002885 Pentatricopeptide_repeat 623 649
IPR002885 Pentatricopeptide_repeat 551 580
IPR002885 Pentatricopeptide_repeat 288 309
IPR002885 Pentatricopeptide_repeat 519 547
IPR002885 Pentatricopeptide_repeat 316 340
IPR002885 Pentatricopeptide_repeat 651 681
IPR002885 Pentatricopeptide_repeat 187 210
IPR002885 Pentatricopeptide_repeat 825 848
IPR002885 Pentatricopeptide_repeat 748 796
IPR002885 Pentatricopeptide_repeat 110 158
No external refs found!