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  5. Sacu_v1.1_s0539.g027481

Sacu_v1.1_s0539.g027481 (ATACA2, ACA2)


Aliases : ATACA2, ACA2

Description : EC_4.2 carbon-oxygen lyase & original description: CDS=619-1599


Gene families : OG0000437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0539.g027481
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00988p00000580 evm_27.TU.AmTr_v1... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.03 OrthoFinder output from all 47 species
AMTR_s01925p00009500 evm_27.TU.AmTr_v1... Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene42582.t2 ACA5, ATACA5,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os09g28130.1 LOC_Os09g28130 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.01 OrthoFinder output from all 47 species
Mp8g09460.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp8g09480.1 ACA4, ATACA4 Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001148 CA_dom 170 307
No external refs found!