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  5. Sacu_v1.1_s1259.g027979

Sacu_v1.1_s1259.g027979


Description : not classified & original description: CDS=334-1545


Gene families : OG0000464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s1259.g027979
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00213810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g058748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011848001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031684001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_15000 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g06607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_9967g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g08652 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g07485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012620_P001 Zm00001e012620 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008507 DUF789 117 391
No external refs found!