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  5. Sacu_v1.1_s2220.g028295

Sacu_v1.1_s2220.g028295


Description : not classified & original description: CDS=1-810


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s2220.g028295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00143350 MKS1,... No description available 0.03 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.04 OrthoFinder output from all 47 species
AT3G18690 MKS1 MAP kinase substrate 1 0.04 OrthoFinder output from all 47 species
Adi_g045081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g081271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22625 MKS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00571.t1 Aspi01Gene00571 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01180.t1 Aspi01Gene01180 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36394.t1 Aspi01Gene36394 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G042800.1 Ceric.29G042800 not classified & original description: pacid=50624678... 0.03 OrthoFinder output from all 47 species
Ceric.33G036000.1 Ceric.33G036000 not classified & original description: pacid=50606361... 0.01 OrthoFinder output from all 47 species
Dac_g23425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001661001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_01280 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g33600.1 MKS1, LOC_Os02g33600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g57520.1 LOC_Os03g57520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g40090.1 MKS1, LOC_Os06g40090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g06760.1 LOC_Os07g06760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g35800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39094 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g35938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003706 No alias not classified & original description: CDS=1-714 0.03 OrthoFinder output from all 47 species
Solyc06g060470.1.1 MKS1, Solyc06g060470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g10899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38545 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g57361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002417_P001 Zm00001e002417 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040850_P001 Zm00001e040850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 48 72
No external refs found!