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  5. Sacu_v1.1_s2981.g028542

Sacu_v1.1_s2981.g028542 (RD21, RD21A)


Aliases : RD21, RD21A

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: CDS=1-672


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s2981.g028542
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00178980 SAG12,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00133800 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
AT1G20850 XCP2 xylem cysteine peptidase 2 0.03 OrthoFinder output from all 47 species
AT3G43960 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G35350 XCP1 xylem cysteine peptidase 1 0.03 OrthoFinder output from all 47 species
AT5G45890 SAG12 senescence-associated gene 12 0.04 OrthoFinder output from all 47 species
Ceric.29G055400.1 Ceric.29G055400 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dcu_g06134 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ehy_g10812 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ehy_g13895 CP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01013420001 XCP1 Protein degradation.peptidase families.cysteine-type... 0.06 OrthoFinder output from all 47 species
GSVIVT01021223001 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023863001 XCP1 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
LOC_Os09g32230.1 SAG12, LOC_Os09g32230 Senescence-specific cysteine protease SAG12... 0.03 OrthoFinder output from all 47 species
Lfl_g11792 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Nbi_g04349 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ore_g05718 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Pir_g26181 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ppi_g06682 SAG12 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Solyc01g107760.4.1 Solyc01g107760 Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g24794 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Tin_g13782 XCP1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e041898_P001 Zm00001e041898 Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 55 114
No external refs found!