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  5. Adi_g001890

Adi_g001890


Description : component *(uL18c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g001890
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00209880 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.02 OrthoFinder output from all 47 species
Ala_g00228 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g20657 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g05557 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g31625 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61260.1 LOC_Os03g61260 component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g30980 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Msp_g22178 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g15098 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g07265 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ppi_g02809 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g45370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g098890.2.1 Solyc12g098890 component psRPL18 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Spa_g00581 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e006246_P001 Zm00001e006246 component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 45 162
No external refs found!