Adi_g003300 (SLO1)


Aliases : SLO1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g003300

Target Alias Description ECC score Gene Family Method Actions
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.03 OrthoFinder output from all 47 species
Adi_g005243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008293 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036720 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g064984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078155 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g080316 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g099202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100622 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g111309 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19247 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62348 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16779 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31176 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37119 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11319 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18331 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67804 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G039400.1 Ceric.13G039400 not classified & original description: pacid=50635903... 0.03 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26858 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40896 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01008173001 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.03 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
GSVIVT01025569001 No alias Pentatricopeptide repeat-containing protein At5g66500,... 0.02 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01030248001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.05 OrthoFinder output from all 47 species
Gb_09382 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_36168 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
Len_g04818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_103380g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_10428421g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_108139g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_109016g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_109016g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_115669g0020 EMB2758 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_12023g0010 No alias RNA editing factor (MEF9) 0.02 OrthoFinder output from all 47 species
MA_121102g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_25515g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_25729g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_30632g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_38687g0010 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species
MA_392600g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
MA_41676g0020 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_43497g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_470679g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_50118g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
MA_62181g0010 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_6511g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_72442g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
MA_74986g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107192 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo111891 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Smo11658 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo127010 OTP81 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo135822 CRR2 Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Smo136851 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo16655 No alias Pentatricopeptide repeat-containing protein At1g06140,... 0.03 OrthoFinder output from all 47 species
Smo174459 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo334 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo417058 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Smo51647 EMB2758 Pentatricopeptide repeat-containing protein At1g15510,... 0.02 OrthoFinder output from all 47 species
Smo61257 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Smo81964 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Smo82268 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
Smo86405 CRR22 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Smo88697 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo90222 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo95871 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.02 OrthoFinder output from all 47 species
Smo96227 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.03 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 222
IPR002885 Pentatricopeptide_repeat 302 326
IPR002885 Pentatricopeptide_repeat 98 119
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 225 272
No external refs found!