Adi_g003839


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g003839

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00109240 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT5G59600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g014376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10029 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32791 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07268 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13525 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20865 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28209 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21963.t1 Aspi01Gene21963 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52145.t1 CRR22, Aspi01Gene52145 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53169.t1 Aspi01Gene53169 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029773 No alias not classified & original description: CDS=1-489 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.03 OrthoFinder output from all 47 species
Azfi_s0312.g064188 No alias not classified & original description: CDS=1-2817 0.02 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24553 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G045800.1 Ceric.02G045800 not classified & original description: pacid=50584171... 0.02 OrthoFinder output from all 47 species
Ceric.36G048100.1 Ceric.36G048100 not classified & original description: pacid=50568569... 0.03 OrthoFinder output from all 47 species
Dac_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28478 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05785 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09819 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g10497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18185 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19488 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22592 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46783 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031849001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03909 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18528 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26141 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05665 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07019 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38362 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15026 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23170 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34533 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09711 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02292 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27693 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005530 CRR22 not classified & original description: CDS=1-2547 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007869 No alias not classified & original description: CDS=1-2253 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Solyc01g049810.4.1 Solyc01g049810 Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Spa_g04429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06501 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18446 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004788 thiamine diphosphokinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 151 197
IPR002885 Pentatricopeptide_repeat 48 96
IPR002885 Pentatricopeptide_repeat 327 350
IPR002885 Pentatricopeptide_repeat 255 283
IPR002885 Pentatricopeptide_repeat 227 253
IPR002885 Pentatricopeptide_repeat 125 148
No external refs found!