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  5. Adi_g003873

Adi_g003873 (TPR1)


Aliases : TPR1

Description : transcriptional co-repressor *(TPL/TPR) & original description: none


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g003873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00159380 TPL, WSIP1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.02 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aob_g27611 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10285.t1 TPR1, Aspi01Gene10285 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35979.t1 TPR2, Aspi01Gene35979 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14665 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g19733 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08671 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017343001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 OrthoFinder output from all 47 species
Gb_32130 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14980.1 TPR1, LOC_Os03g14980 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
MA_10430083g0010 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Nbi_g03198 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04998 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g35084 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019559 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023979 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g116750.3.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species
Zm00001e017248_P004 TPR2, Zm00001e017248 transcriptional repressor (TPL). transcriptional... 0.01 OrthoFinder output from all 47 species
Zm00001e038558_P003 TPR1, Zm00001e038558 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Zm00001e040187_P001 TPR1, Zm00001e040187 transcriptional repressor (TPL). transcriptional... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 242 280
IPR001680 WD40_repeat 672 704
IPR001680 WD40_repeat 202 237
No external refs found!