Adi_g004333


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g004333

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g003860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083433 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18238 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0106.g045082 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Cba_g03971 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07466 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Dac_g43765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Gb_14728 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60000.1 SLO1, LOC_Os01g60000 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.03 OrthoFinder output from all 47 species
LOC_Os06g30940.1 LOC_Os06g30940 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Len_g18296 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429043g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_140208g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_3612g0010 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g28511 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30070 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_16110V3.1 CRR22, Pp3c14_16110 Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Solyc01g098480.3.1 Solyc01g098480 Pentatricopeptide repeat-containing protein At2g21090... 0.02 OrthoFinder output from all 47 species
Solyc02g084830.4.1 Solyc02g084830 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.03 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Solyc07g008480.3.1 Solyc07g008480 Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.04 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e038850_P001 EMB2758, Zm00001e038850 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 63 109
IPR002885 Pentatricopeptide_repeat 130 161
IPR002885 Pentatricopeptide_repeat 38 60
IPR046848 E_motif 181 242
No external refs found!