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  5. Adi_g006630

Adi_g006630 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g006630

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00121090 WLIM1,... RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
Adi_g004397 WLIM1 LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04744 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065256 WLIM1 LIM-type transcription factor & original description: CDS=201-761 0.03 OrthoFinder output from all 47 species
GSVIVT01016382001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
Len_g07886 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03720 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26729 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 58 113
No external refs found!