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  5. Adi_g007889

Adi_g007889 (LRL1)


Aliases : LRL1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g007889
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00241810 CIB1,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 OrthoFinder output from all 47 species
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 OrthoFinder output from all 47 species
Ceric.34G041700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01008093001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01031020001 BEE3 External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Mp3g17930.1 ATRSL1, RSL1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pir_g11202 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05994 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_8460V3.1 RSL2, Pp3c3_8460 ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 OrthoFinder output from all 47 species
Solyc01g090790.4.1 UNE10, Solyc01g090790 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g31061 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27626 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 123 168
No external refs found!