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  5. Adi_g008512

Adi_g008512 (SGR4, ZIG1, VTI1A,...)


Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g008512

Target Alias Description ECC score Gene Family Method Actions
AT5G39510 SGR4, ZIG1,... Vesicle transport v-SNARE family protein 0.03 OrthoFinder output from all 47 species
Als_g22401 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aob_g21811 VTI12, VTI1B, ATVTI12 Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aop_g25830 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cre13.g577500 VTI12, VTI1B, ATVTI12 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Dac_g04060 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Dcu_g25235 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Ehy_g07395 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Len_g35595 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Mp1g12970.1 SGR4, ZIG1,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Nbi_g04578 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000290 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e027750_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!