Adi_g008560 (NF-YC2, ATHAP5B, HAP5B)

Aliases : NF-YC2, ATHAP5B, HAP5B

Description : component *(NF-YC) of NF-Y transcription factor complex & original description: none

Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g008560
Cluster	HCCA: Cluster_313

Target	Alias	Description	ECC score	Gene Family Method
AT3G48590	HAP5A, NF-YC1, ATHAP5A	nuclear factor Y, subunit C1	0.03	OrthoFinder output from all 47 species
Aev_g06001	HAP5A, NF-YC1, ATHAP5A	component *(NF-YC) of NF-Y transcription factor complex...	0.06	OrthoFinder output from all 47 species
Aspi01Gene14120.t1	HAP5A, NF-YC1,...	component *(NF-YC) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022054	NF-YC2, ATHAP5B, HAP5B	component *(NF-YC) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Solyc06g072040.1.1	HAP5A, NF-YC1,...	component NF-YC of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
Spa_g47083	HAP5A, NF-YC1, ATHAP5A	component *(NF-YC) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Tin_g00623	HAP5A, NF-YC1, ATHAP5A	component *(NF-YC) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	50	122

External Links

No external refs found!