Adi_g008615 (AGL2, SEP1)

Aliases : AGL2, SEP1

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g008615

Target	Alias	Description	ECC score	Gene Family Method
AT4G37940	AGL21	AGAMOUS-like 21	0.03	OrthoFinder output from all 47 species
AT5G51870	AGL71	AGAMOUS-like 71	0.03	OrthoFinder output from all 47 species
LOC_Os06g22540.1	LOC_Os06g22540	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pp3c16_19170V3.1	AGL61, DIA, Pp3c16_19170	AGAMOUS-like 61	0.01	OrthoFinder output from all 47 species
Solyc12g056460.3.1	SOC1, AGL20,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	75	160
IPR002100	TF_MADSbox	1	47

External Links

No external refs found!