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  5. Adi_g008635

Adi_g008635 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g008635
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Dac_g07647 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08720 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15611 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23607 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23608 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03349 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g40700.1 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os10g40710.1 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g06900.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0009277 fungal-type cell wall IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 220 297
IPR009009 RlpA-like_DPBB 124 209
No external refs found!