Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO
Description : organellar-signalling mediator *(RCD1) & original description: none
Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Adi_g009409 | |
| Cluster | HCCA: Cluster_118 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G47720 | SRO4 | similar to RCD one 4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003306 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g008312 | SRO3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G016700.1 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04971 | AtRCD1, RCD1,... | organellar-signalling mediator *(RCD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g12820.1 | SRO2, LOC_Os03g12820 | Probable inactive poly [ADP-ribose] polymerase SRO2... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114360.4.1 | SRO5, Solyc03g114360 | Probable inactive poly [ADP-ribose] polymerase SRO5... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012317 | Poly(ADP-ribose)pol_cat_dom | 170 | 263 |
| No external refs found! |
