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  5. Adi_g010424

Adi_g010424 (DCL4, ATDCL4)


Aliases : DCL4, ATDCL4

Description : endoribonuclease (DCL4) of transacting siRNA pathway & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Adi_g010424

Target Alias Description ECC score Gene Family Method Actions
Adi_g068389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47448.t2 DCL1, CAF,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01358 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.04 OrthoFinder output from all 47 species
Ceric.1Z315900.1 DCL4, ATDCL4,... endoribonuclease (DCL4) of transacting siRNA pathway &... 0.02 OrthoFinder output from all 47 species
Dac_g32180 DCL1, CAF,... endoribonuclease *(DCL3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08330 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.03 OrthoFinder output from all 47 species
Ehy_g15595 DCL1, CAF,... endoribonuclease *(DCL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16743 ATDCL2, DCL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_311065g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g15966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45378 DCL1, CAF,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54675 ATDCL2, DCL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g053085.1.1 Solyc03g053085 Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 130 289
IPR001650 Helicase_C 466 584
IPR003100 PAZ_dom 947 1075
IPR000999 RNase_III_dom 1118 1247
IPR000999 RNase_III_dom 1323 1442
No external refs found!