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  5. Adi_g010705

Adi_g010705 (RAB1C, ATRAB1C, ATRABD2C)


Aliases : RAB1C, ATRAB1C, ATRABD2C

Description : D-class RAB GTPase & original description: none


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g010705

Target Alias Description ECC score Gene Family Method Actions
Ceric.39G002700.1 RAB1C, ATRAB1C,... D-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.18 RAB1C, ATRAB1C, ATRABD2C Ras-related protein RABD2c OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.10 RAB1C, ATRAB1C, ATRABD2C Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dcu_g35830 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013868001 RAB1C, ATRAB1C, ATRABD2C Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
GSVIVT01023224001 ATFP8, RABD1, ATRABD1 Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Gb_01493 ATRAB1B, RABD2A,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Lfl_g29131 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g00710.1 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Pp3c10_190V3.1 ATRAB1B, RABD2A,... RAS 5 0.02 OrthoFinder output from all 47 species
Ppi_g04889 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19661 No alias D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48359 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015303_P001 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e029693_P001 RAB1C, ATRAB1C,... D-class RAB GTPase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 3 163
No external refs found!