1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g013330

Adi_g013330 (ATRAB1B, RABD2A,...)


Aliases : ATRAB1B, RABD2A, ATRABD2A, ARA5, RA-5, ARA-5

Description : D-class RAB GTPase & original description: none


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g013330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00145590 ATRAB1B, RABD2A,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Adi_g046907 RAB1C, ATRAB1C, ATRABD2C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24852 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g55676 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G002700.1 RAB1C, ATRAB1C,... D-class RAB GTPase & original description:... 0.05 OrthoFinder output from all 47 species
Cre12.g560150 ATRAB1A, ATRABD2B, RAB1A Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Dcu_g23024 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35830 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g08450.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g39512 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29131 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g23010.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Mp3g00710.1 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Pnu_g07908 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07909 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c10_190V3.1 ATRAB1B, RABD2A,... RAS 5 0.01 OrthoFinder output from all 47 species
Ppi_g05020 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052070.3.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc05g053940.3.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Solyc08g078070.4.1 RAB1C, ATRAB1C,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g17450 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015303_P001 ATRAB1B, RABD2A,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 170
No external refs found!