Aliases : AGL16
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dde_g09236 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g49840.1 | AGL16, LOC_Os02g49840 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26280 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59052 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15985 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006239 | SHP2, AGL5 | not classified & original description: CDS=497-1018 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011014 | AGL9, SEP3 | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g089200.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23260 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003667_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030373_P001 | AGL10, CAL1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031267_P003 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039774_P001 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| No external refs found! |
