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  5. Adi_g015162

Adi_g015162


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g015162
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Als_g02920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009606 No alias not classified & original description: CDS=49-915 0.03 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11753 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_10429697g0010 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_8855586g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g07925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c21_17930V3.1 Pp3c21_17930 Pentapeptide repeat-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001784 No alias not classified & original description: CDS=1-996 0.04 OrthoFinder output from all 47 species
Sam_g15961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc08g079110.4.1 Solyc08g079110 Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g08899 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g18697 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g10553 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 89 128
IPR001646 5peptide_repeat 156 191
No external refs found!