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  5. Adi_g018361

Adi_g018361


Description : component *(eL33) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g018361
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00195890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G74270 No alias Ribosomal protein L35Ae family protein 0.03 OrthoFinder output from all 47 species
Ala_g22035 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dac_g01908 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Gb_35488 No alias component RPL35a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os02g54470.1 LOC_Os02g54470 component RPL35a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g20427 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c11_9630V3.1 Pp3c11_9630 Ribosomal protein L35Ae family protein 0.02 OrthoFinder output from all 47 species
Sam_g38788 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc05g052800.3.1 Solyc05g052800 component RPL35a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Tin_g02369 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 11 105
No external refs found!