Aliases : TPR1
Description : transcriptional co-repressor *(TPL/TPR) & original description: none
Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00051p00079490 | TPR1,... | RNA biosynthesis.transcriptional repression.TPL/TPR... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15750 | TPL, WSIP1 | Transducin family protein / WD-40 repeat family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G15880 | WSIP2, TPR4 | WUS-interacting protein 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g072245 | WSIP2, TPR4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g18277 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g32947 | TPL, WSIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16532 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G013800.1 | TPL, WSIP1,... | transcriptional co-repressor *(TPL/TPR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G074400.1 | TPL, WSIP1,... | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20506 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03492 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g25643 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024440001 | TPL, WSIP1 | RNA biosynthesis.transcriptional repression.TPL/TPR... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031186001 | TPR3 | RNA biosynthesis.transcriptional repression.TPL/TPR... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_32130 | TPL, WSIP1 | transcriptional repressor (TPL). transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39002 | TPR2 | transcriptional repressor (TPL). transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g14980.1 | TPR1, LOC_Os03g14980 | transcriptional repressor (TPL). transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g35793 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40403 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10430083g0010 | TPL, WSIP1 | transcriptional repressor (TPL). transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| MA_464893g0010 | WSIP2, TPR4 | Protein TPR3 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| MA_98943g0010 | TPR2 | Protein TPR1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g40005 | TPL, WSIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35084 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g56913 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004827 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16347 | No alias | transcriptional co-repressor *(TPL/TPR) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo163891 | TPR1 | RNA biosynthesis.transcriptional repression.TPL/TPR... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040187_P001 | TPR1, Zm00001e040187 | transcriptional repressor (TPL). transcriptional... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| No external refs found! |
