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  5. Adi_g020149

Adi_g020149 (ATPCNA1, PCNA1)


Aliases : ATPCNA1, PCNA1

Description : sliding clamp protein *(PCNA) & original description: none


Gene families : OG0002250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g020149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259890 ATPCNA1, PCNA1,... Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
AT1G07370 ATPCNA1, PCNA1 proliferating cellular nuclear antigen 1 0.02 OrthoFinder output from all 47 species
Als_g07143 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11632 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47926.t1 ATPCNA1, PCNA1,... sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G042200.1 ATPCNA1, PCNA1,... sliding clamp protein *(PCNA) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01024815001 PCNA2, ATPCNA2 Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
LOC_Os02g56130.1 PCNA2, ATPCNA2,... sliding clamp protein (PCNA) 0.02 OrthoFinder output from all 47 species
Len_g11664 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09130 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07886 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.04 OrthoFinder output from all 47 species
Smo105735 ATPCNA1, PCNA1 Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
Solyc06g076660.3.1 PCNA2, ATPCNA2,... sliding clamp protein (PCNA) 0.03 OrthoFinder output from all 47 species
Spa_g12144 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12145 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51877 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023660_P001 PCNA2, ATPCNA2,... sliding clamp protein (PCNA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006275 regulation of DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR022648 Pr_cel_nuc_antig_N 1 79
IPR022649 Pr_cel_nuc_antig_C 81 201
No external refs found!