Adi_g020210


Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g020210

Target Alias Description ECC score Gene Family Method Actions
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.02 OrthoFinder output from all 47 species
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.03 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45695.t2 OPCL1, Aspi01Gene45695 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30890 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.04 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.07 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28355 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008694001 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g67530.1 LOC_Os01g67530 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os07g17970.1 LOC_Os07g17970 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
Lfl_g15634 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g16468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17189 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g02184 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025886 OPCL1 not classified & original description: CDS=370-2175 0.03 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo177466 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g01541 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21116 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e032697_P002 Zm00001e032697 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 512 587
IPR000873 AMP-dep_Synth/Lig_com 101 503
No external refs found!