1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g020724

Adi_g020724 (ATHB1, ATHB-1, HAT5,...)


Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g020724

Target Alias Description ECC score Gene Family Method Actions
AT2G22430 HB6, ATHB6 homeobox protein 6 0.03 OrthoFinder output from all 47 species
Adi_g082074 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g116604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01669 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g17810 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38597.t1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49447.t1 ATHB13, Aspi01Gene49447 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G054300.1 ATHB16, HB16,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g23624 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019655001 HB-7, ATHB-7, ATHB7 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_35959 ATHB40, HB40, HB-5 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Gb_39722 ATHB13 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os02g49700.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08960.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os07g39320.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Lfl_g08737 HB6, ATHB6 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g07285 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g06999 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g36995 HB6, ATHB6 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g17185 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g24965 HB6, ATHB6 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g02749 ATHB13 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Ppi_g54343 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g006980.3.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Spa_g05577 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g06237 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g16039 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g46327 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010637_P001 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 3 57
No external refs found!