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  5. Adi_g022624

Adi_g022624 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g022624
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
Adi_g079282 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079893 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13677 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38452 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13200.t1 CDF3, Aspi01Gene13200 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28487.t1 Aspi01Gene28487 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.02 OrthoFinder output from all 47 species
Cba_g71501 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G043000.1 TMO6, Ceric.39G043000 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g521150 CDF2 RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
GSVIVT01007758001 HCA2, DOF5.6 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Gb_09906 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Lfl_g05583 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26476 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26562 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023637 CDF3 transcription factor *(DOF) & original description: CDS=1-1434 0.03 OrthoFinder output from all 47 species
Sam_g18370 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g062520.1.1 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g069760.3.1 CDF3, Solyc06g069760 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 23 77
No external refs found!