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  5. Adi_g022660

Adi_g022660


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g022660

Target Alias Description ECC score Gene Family Method Actions
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002434 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008293 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018038 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13525 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54924 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19340 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036353 No alias not classified & original description: CDS=1-2463 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048778 No alias not classified & original description: CDS=1-2676 0.03 OrthoFinder output from all 47 species
Azfi_s0731.g084096 No alias not classified & original description: CDS=1-3909 0.03 OrthoFinder output from all 47 species
Cba_g24553 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28518 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_23144g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22818 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017880 No alias not classified & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020627 No alias not classified & original description: CDS=1-2037 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.02 OrthoFinder output from all 47 species
Sam_g35116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 277 323
IPR002885 Pentatricopeptide_repeat 681 726
IPR002885 Pentatricopeptide_repeat 479 525
IPR002885 Pentatricopeptide_repeat 75 121
IPR002885 Pentatricopeptide_repeat 251 273
IPR002885 Pentatricopeptide_repeat 554 580
IPR002885 Pentatricopeptide_repeat 582 612
IPR002885 Pentatricopeptide_repeat 453 473
IPR002885 Pentatricopeptide_repeat 380 409
IPR002885 Pentatricopeptide_repeat 49 70
IPR002885 Pentatricopeptide_repeat 785 814
IPR002885 Pentatricopeptide_repeat 150 170
No external refs found!