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  5. Adi_g022676

Adi_g022676


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g022676
Cluster HCCA: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
Adi_g013859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g01173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13471 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g50955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29428 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_32677 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g23120.1 LOC_Os08g23120 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g38410.1 LOC_Os08g38410 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_125759g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g11176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_33600V3.1 Pp3c1_33600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g02211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g093340.3.1 Solyc02g093340 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 107 176
IPR000504 RRM_dom 20 87
No external refs found!