Adi_g024199


Description : chromatin remodeling factor *(Rad5-like) & original description: none


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g024199

Target Alias Description ECC score Gene Family Method Actions
Cba_g06489 No alias chromatin remodeling factor *(Rad5-like) & original... 0.02 OrthoFinder output from all 47 species
Cre11.g479300 No alias Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01012701001 No alias Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc05g044480.3.1 Solyc05g044480 chromatin remodeling factor (Rad5-like) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 448 699
IPR000330 SNF2_N 230 345
IPR001650 Helicase_C 817 925
IPR018957 Znf_C3HC4_RING-type 723 765
No external refs found!