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  5. Ehy_g10162

Ehy_g10162 (LBD20)


Aliases : LBD20

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g10162
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT3G27650 LBD25 LOB domain-containing protein 25 0.04 OrthoFinder output from all 47 species
Aob_g13722 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036906 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g43172 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g41600.1 ASL1, LBD36,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Lfl_g15972 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_185511g0010 LBD4 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_962403g0010 LBD19 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Msp_g09789 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38666 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42314 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27127 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29331 No alias AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55835 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038582_P001 LBD18, Zm00001e038582 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 12 110
No external refs found!