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  5. Ehy_g11168

Ehy_g11168


Description : component *(LUX) of circadian clock Evening complex (EC) & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g11168
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00186590 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00081480 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44133 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31778.t2 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009393 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Cre02.g083750 LUX, PCL1 Transcription factor BOA OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre02.g094150 APRR9, TL1, PRR9 Two-component response regulator-like APRR9... 0.02 OrthoFinder output from all 47 species
Gb_10394 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os02g08500.1 ARR10, RR10,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os06g08440.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Len_g37967 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24241 No alias MYB-RELATED transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35598 ARR1, RR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39721 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32628 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37790 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Spa_g46548 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47334 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Spa_g47537 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51591 ARR10, RR10 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01192 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 173 221
No external refs found!