Adi_g035623


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g035623

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g018634 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053729 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19051 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31466.t1 Aspi01Gene31466 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36735.t1 Aspi01Gene36735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037173 No alias not classified & original description: CDS=1-2688 0.03 OrthoFinder output from all 47 species
Azfi_s0134.g049391 No alias not classified & original description: CDS=1-2007 0.02 OrthoFinder output from all 47 species
Cba_g67474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08758 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06446 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23174 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44153 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05927 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000685 No alias not classified & original description: CDS=1-2475 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002236 No alias not classified & original description: CDS=1-2649 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.02 OrthoFinder output from all 47 species
Sam_g38908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo51483 CRR22 Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Tin_g17439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 200 224
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
No external refs found!