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  5. Adi_g041824

Adi_g041824


Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g041824
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT3G22230 No alias Ribosomal L27e protein family 0.03 OrthoFinder output from all 47 species
AT4G15000 No alias Ribosomal L27e protein family 0.03 OrthoFinder output from all 47 species
Adi_g039162 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Adi_g042919 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g39103 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.22G025300.1 Ceric.22G025300 component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021275.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre17.g701650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01020410001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Len_g27313 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp4g23910.1 No alias component RPL27 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ppi_g19581 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g22766 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g30677 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g48247 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g03073 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 136
No external refs found!