Ehy_g12010 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g12010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00049p00128080	evm_27.TU.AmTr_v1...	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
AMTR_s00076p00195870	PGP1, ABCB1,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AT1G02520	PGP11	P-glycoprotein 11	0.03	OrthoFinder output from all 47 species
AT3G28860	ABCB19,...	ATP binding cassette subfamily B19	0.04	OrthoFinder output from all 47 species
Adi_g021749	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g11046	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g34073	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02407	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene45620.t1	PGP11, Aspi01Gene45620	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene46501.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46795.t1	PGP2, Aspi01Gene46795	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001271	ABCB19,...	subfamily ABCB transporter & original description: CDS=82-3879	0.02	OrthoFinder output from all 47 species
Azfi_s0099.g044118	PGP20	subfamily ABCB transporter & original description: CDS=2010-6257	0.02	OrthoFinder output from all 47 species
Azfi_s0208.g057960	PGP2	not classified & original description: CDS=388-3987	0.02	OrthoFinder output from all 47 species
Cba_g38324	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.18G065900.1	PGP2, Ceric.18G065900	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G025500.1	PGP2, Ceric.36G025500	subfamily ABCB transporter & original description:...	0.05	OrthoFinder output from all 47 species
GSVIVT01025040001	PGP20	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_20009	PGP6	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_31652	PGP6	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g74470.1	PGP20, LOC_Os01g74470	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os04g54930.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Len_g05883	PGP1, ABCB1, ATPGP1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_14136g0010	PGP20	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_18604g0010	PGP12	ABC transporter B family member 12 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_9415070g0020	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp2g02910.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp2g06270.1	PGP20	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Msp_g01686	PGP6	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g36979	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g03862	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g37290	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g09833	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g13949	PGP12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c21_18190V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.02	OrthoFinder output from all 47 species
Ppi_g03284	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04001	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g18874	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006646	PGP20	subfamily ABCB transporter & original description: CDS=24-3872	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899	PGP11	subfamily ABCB transporter & original description: CDS=362-4450	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021690	ABCB19,...	not classified & original description: CDS=77-2374	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.03	OrthoFinder output from all 47 species
Sam_g03721	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g04479	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo169182	ATPGP4, PGP4, ABCB4, MDR4	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo236972	ABCB19,...	ABC transporter B family member 19 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Smo410515	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo419451	No alias	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Solyc03g122070.3.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Spa_g08601	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g18285	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26470	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g44850	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019933_P001	Zm00001e019933	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e041760_P001	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	415	563
IPR003439	ABC_transporter-like_ATP-bd	1072	1219
IPR011527	ABC1_TM_dom	72	346
IPR011527	ABC1_TM_dom	730	1002

External Links

No external refs found!

Ehy_g12010 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation