1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g12103

Ehy_g12103


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g12103
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00264470 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g25187 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07065 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04970 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07325.t1 Aspi01Gene07325 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16818.t1 Aspi01Gene16818 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G035900.1 Ceric.36G035900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g15370 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38152 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05158 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19236 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g19440.1 LOC_Os01g19440 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_112715g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27618 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59766 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44288 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Spa_g40908 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49901 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55676 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20547 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 2 145
No external refs found!