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  5. Adi_g043690

Adi_g043690


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g043690

Target Alias Description ECC score Gene Family Method Actions
Adi_g025455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27915.t1 Aspi01Gene27915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009227 No alias not classified & original description: CDS=1-1950 0.05 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.04 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71700 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G060900.1 OTP84, Ceric.37G060900 not classified & original description: pacid=50616435... 0.05 OrthoFinder output from all 47 species
Dac_g39492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Lfl_g07417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08720 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63861 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020215 No alias not classified & original description: CDS=1-5316 0.04 OrthoFinder output from all 47 species
Solyc02g079380.2.1 CRR22, Solyc02g079380 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
Solyc07g005850.3.1 Solyc07g005850 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 40 102
IPR046849 Eplus_motif 107 131
IPR032867 DYW_dom 138 229
No external refs found!