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  5. Adi_g046888

Adi_g046888


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g046888

Target Alias Description ECC score Gene Family Method Actions
AT1G51200 No alias A20/AN1-like zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT2G27580 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08393.t2 Aspi01Gene08393 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25155.t1 Aspi01Gene25155 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Len_g03084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010371 No alias not classified & original description: CDS=1-684 0.02 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 25 46
IPR000058 Znf_AN1 99 136
No external refs found!