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  5. Adi_g048053

Adi_g048053


Description : not classified & original description: none


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g048053

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00140230 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00128800 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.06 OrthoFinder output from all 47 species
AMTR_s00071p00129300 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00129830 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00130010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00131570 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00133060 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00149400 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Als_g51757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Lfl_g26674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431045g0030 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_10431045g0040 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Mp4g14250.1 No alias Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
Ore_g25382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g121040.4.1 Solyc03g121040 Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Spa_g47697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016597_P001 Zm00001e016597 Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 48 174
IPR003819 TauD/TfdA-like 296 342
No external refs found!