Adi_g049439 (OVA4)

Aliases : OVA4

Description : organellar tryptophan-tRNA ligase & original description: none

Gene families : OG0006953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006953_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g049439

Target	Alias	Description	ECC score	Gene Family Method
Aev_g09607	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0029.g024201	OVA4	organellar tryptophan-tRNA ligase & original...	0.04	OrthoFinder output from all 47 species
Cba_g32976	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.16G037600.1	OVA4, Ceric.16G037600	organellar tryptophan-tRNA ligase & original...	0.02	OrthoFinder output from all 47 species
Ceric.1Z156000.1	OVA4, Ceric.1Z156000	organellar tryptophan-tRNA ligase & original...	0.05	OrthoFinder output from all 47 species
Cre05.g238322	OVA4	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Dcu_g01309	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g12437	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10255	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01035293001	OVA4	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
LOC_Os01g54020.1	OVA4, LOC_Os01g54020	tryptophan-tRNA ligase	0.02	OrthoFinder output from all 47 species
Len_g30338	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g18820.1	OVA4	tryptophan-tRNA ligase	0.05	OrthoFinder output from all 47 species
Ore_g25968	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g11182	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003476	OVA4	organellar tryptophan-tRNA ligase & original...	0.06	OrthoFinder output from all 47 species
Sam_g35390	No alias	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g095850.2.1	OVA4, Solyc12g095850	tryptophan-tRNA ligase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
CC	GO:0009317	acetyl-CoA carboxylase complex	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016421	CoA carboxylase activity	IEP	HCCA
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	HCCA
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030151	molybdenum ion binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002305	aa-tRNA-synth_Ic	75	365

External Links

No external refs found!

Adi_g049439 (OVA4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation