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  5. Ehy_g12801

Ehy_g12801 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g12801
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Aop_g03843 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33295.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33295.t2 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33301.t1 LOP1, TRN1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33306.t1 Aspi01Gene33306 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030849 No alias not classified & original description: CDS=1-2208 0.03 OrthoFinder output from all 47 species
GSVIVT01037769001 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g30260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31881 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 265 286
IPR001611 Leu-rich_rpt 208 231
IPR001611 Leu-rich_rpt 237 259
IPR001611 Leu-rich_rpt 314 327
No external refs found!