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  5. Ehy_g13025

Ehy_g13025


Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g13025

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221140 evm_27.TU.AmTr_v1... Reticulon-like protein B9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G23640 RTNLB13 Reticulan like protein B13 0.03 OrthoFinder output from all 47 species
AT3G19460 No alias Reticulon family protein 0.02 OrthoFinder output from all 47 species
AT4G01230 No alias Reticulon family protein 0.04 OrthoFinder output from all 47 species
Adi_g113947 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42179 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Als_g43655 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Als_g60937 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aop_g69441 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Cba_g04424 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g76150 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.16G008000.1 Ceric.16G008000 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Ceric.21G003500.1 Ceric.21G003500 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Dcu_g14887 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.06 OrthoFinder output from all 47 species
GSVIVT01005053001 RTNLB13 Reticulon-like protein B13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_10741 No alias ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Gb_41628 No alias ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
LOC_Os01g63240.1 LOC_Os01g63240 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os04g29920.1 LOC_Os04g29920 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os05g24770.1 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Len_g09890 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Len_g22662 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Len_g26287 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Lfl_g05242 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Lfl_g27211 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species
Mp6g03260.1 RTNLB2, BTI2 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Ore_g29195 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ppi_g07402 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025006 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Sam_g20068 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Solyc03g119190.3.1 Solyc03g119190 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Solyc10g011870.3.1 Solyc10g011870 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Spa_g02967 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Spa_g48899 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Spa_g51559 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Spa_g56482 RTNLB3 ER-tubule curvature-inducing protein *(Reticulon) &... 0.05 OrthoFinder output from all 47 species
Zm00001e032328_P001 Zm00001e032328 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 32 186
No external refs found!