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  5. Ehy_g13055

Ehy_g13055 (NRPE9A, NRPB9A, NRPD9A)


Aliases : NRPE9A, NRPB9A, NRPD9A

Description : component *(NRPE9) of RNA polymerase V complex & original description: none


Gene families : OG0003486 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g13055

Target Alias Description ECC score Gene Family Method Actions
Ceric.35G067400.1 Ceric.35G067400 component *(NRPE9) of RNA polymerase V complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.25 NRPE9A, NRPB9A, NRPD9A RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001529 DNA-dir_RNA_pol_M/15kDasu 38 74
No external refs found!