Adi_g053631 (MEF19)


Aliases : MEF19

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g053631

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00218280 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002777 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g003279 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g033133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036784 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g094349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27898 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02630.t1 CRK8, Aspi01Gene02630 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37733.t1 Aspi01Gene37733 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016204 OTP84 not classified & original description: CDS=27-2648 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043353 No alias not classified & original description: CDS=1-2244 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34429 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35114 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.02 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.03 OrthoFinder output from all 47 species
Ceric.29G053300.1 Ceric.29G053300 not classified & original description: pacid=50624372... 0.03 OrthoFinder output from all 47 species
Dac_g18287 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Len_g04697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_470679g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
MA_62181g0010 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Msp_g13610 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63861 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35988 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018468 No alias solute transporter *(MTCC) & original description: CDS=2675-4273 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019259 No alias not classified & original description: CDS=1-1518 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.02 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041987_P001 Zm00001e041987 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 300 322
IPR002885 Pentatricopeptide_repeat 228 256
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 124 169
No external refs found!