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  5. Adi_g054055

Adi_g054055 (RAN1, RAN-1, ATRAN1)


Aliases : RAN1, RAN-1, ATRAN1

Description : GTPase *(Ran) & original description: none


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g054055

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00207870 RAN3, ATRAN3,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Azfi_s0147.g053043 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.04 OrthoFinder output from all 47 species
Azfi_s0548.g076431 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.04 OrthoFinder output from all 47 species
Ceric.13G061400.1 RAN3, ATRAN3,... GTPase *(Ran) & original description: pacid=50636783... 0.03 OrthoFinder output from all 47 species
Ehy_g07410 RAN2 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015482001 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
GSVIVT01035804001 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Lfl_g22288 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g19920.1 RAN2 Ran GTPase 0.02 OrthoFinder output from all 47 species
Pir_g27776 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027977_P001 RAN3, ATRAN3,... Ran GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 126
No external refs found!