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  5. Adi_g054490

Adi_g054490


Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0000947 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g054490

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00203200 evm_27.TU.AmTr_v1... Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
AMTR_s00070p00046580 evm_27.TU.AmTr_v1... Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Ala_g01848 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06509 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03171 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04759 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30520 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015591 No alias co-chaperone *(Hsp40) & original description: CDS=120-1841 0.04 OrthoFinder output from all 47 species
Cba_g17367 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G065700.1 Ceric.05G065700 co-chaperone *(Hsp40) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G051400.1 Ceric.13G051400 co-chaperone *(Hsp40) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G039800.1 Ceric.20G039800 co-chaperone *(Hsp40) & original description:... 0.02 OrthoFinder output from all 47 species
Cre12.g507650 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Dac_g00804 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13242 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13529 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g56040.1 LOC_Os02g56040 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
LOC_Os05g26902.1 LOC_Os05g26902 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
LOC_Os05g26926.1 LOC_Os05g26926 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Len_g01253 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
MA_91734g0010 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Mp8g17710.1 No alias co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Msp_g11631 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18499 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09458 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13465 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13488 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14679 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014072 No alias co-chaperone *(Hsp40) & original description: CDS=133-1413 0.02 OrthoFinder output from all 47 species
Sam_g23499 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Smo167519 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Smo271998 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
Solyc01g105340.4.1 Solyc01g105340 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Solyc03g116790.4.1 Solyc03g116790 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Spa_g10094 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12321 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02021 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016156_P001 Zm00001e016156 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Zm00001e021762_P003 Zm00001e021762 co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species
Zm00001e040269_P001 Zm00001e040269 co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 80 141
IPR001305 HSP_DnaJ_Cys-rich_dom 222 285
IPR002939 DnaJ_C 197 412
No external refs found!