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  5. Adi_g055967

Adi_g055967


Description : not classified & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g055967
Cluster HCCA: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00216130 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from all 47 species
AT3G26490 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
AT5G47800 No alias Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
Als_g08124 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08949.t1 Aspi01Gene08949 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene17057.t1 RPT3, NPH3,... substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Dac_g10465 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os09g25330.1 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_52004g0010 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Nbi_g10804 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g03108 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g06471 RPT3, NPH3, JK218 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000950 No alias not classified & original description: CDS=1-2517 0.03 OrthoFinder output from all 47 species
Sam_g29392 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Sam_g39393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01088 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 41 284
No external refs found!