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  5. Adi_g056473

Adi_g056473 (XRN3, AtXRN3)


Aliases : XRN3, AtXRN3

Description : exoribonuclease *(RAT1/XRN2) & original description: none


Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056473

Target Alias Description ECC score Gene Family Method Actions
Adi_g069080 XRN3, AtXRN3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15103 XRN3, AtXRN3 exoribonuclease *(RAT1/XRN2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15159.t1 XRN3, AtXRN3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16564 EIN5, AIN1, XRN4, ATXRN4 exoribonuclease *(XRN4) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G049400.1 XRN3, AtXRN3,... exoribonuclease *(RAT1/XRN2) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01021865001 EIN5, AIN1, XRN4, ATXRN4 RNA processing.RNA decay.deadenylation-dependent... 0.02 OrthoFinder output from all 47 species
Len_g17362 EIN5, AIN1, XRN4, ATXRN4 exoribonuclease *(XRN4) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50910 XRN3, AtXRN3 exoribonuclease *(RAT1/XRN2) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06753 XRN3, AtXRN3 exoribonuclease *(RAT1/XRN2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430844g0010 XRN3, AtXRN3 exoribonuclease (RAT1/XRN2) 0.03 OrthoFinder output from all 47 species
Mp3g08820.1 XRN3, AtXRN3 exoribonuclease (RAT1/XRN2) 0.02 OrthoFinder output from all 47 species
Sam_g12064 No alias exoribonuclease *(RAT1/XRN2) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38845 No alias exoribonuclease *(XRN4) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g089280.2.1 XRN3, AtXRN3,... exoribonuclease (RAT1/XRN2) 0.02 OrthoFinder output from all 47 species
Zm00001e011879_P001 EIN5, AIN1,... EBF-modulating exoribonuclease (EIN5/XRN4).... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 263 277
IPR004859 Xrn1_N 1 253
IPR041412 Xrn1_helical 326 837
No external refs found!